| BioGRID | | Biological General Repository for Interaction Datasets | | http://www.thebiogrid.org/ | | February 2nd, 2017 | | The Biological General Repository for Interaction Datasets (BioGRID) database was developed to house and distribute collections of protein and genetic interactions from major model organism species, as derived from both high-throughput studies and conventional focused studies.
Through comprehensive curation efforts, BioGRID now includes a virtually complete set of interactions reported to date in the primary literature for both the budding yeast Saccharomyces cerevisiae and the fission yeast Schizosaccharomyces pombe.
| | | | Primary | | Free to all users | The GRID: the General Repository for Interaction Datasets
Breitkreutz BJ, Stark C, Tyers M.
Genome Biol. 2003;4(3):R23
BioGRID: a general repository for interaction datasets
Stark C, Breitkreutz BJ, Reguly T, Boucher L, Breitkreutz A, Tyers M.
Nucleic Acids Res. 2006 Jan 1;34(Database issue):D535-9
The BioGRID Interaction Database: 2008 update
Breitkreutz BJ, Stark C, Reguly T, Boucher L, Breitkreutz A, Livstone M, Oughtred R, Lackner DH, Bähler J, Wood V, Dolinski K, Tyers M.
Nucleic Acids Res. 2008 Jan;36(Database issue):D637-40
The BioGRID Interaction Database: 2011 update.
Stark C, Breitkreutz BJ, Chatr-Aryamontri A, Boucher L, Oughtred R, Livstone MS, Nixon J, Van Auken K, Wang X, Shi X, Reguly T, Rust JM, Winter A, Dolinski K, Tyers M
Nucleic Acids Res. 2011 Jan;39(Database issue):D698-704.
BioGRID REST Service, BiogridPlugin2 and BioGRID WebGraph: new tools for access to interaction data at BioGRID.
Winter AG, Wildenhain J, Tyers M
Bioinformatics. 2011 Apr 1;27(7):1043-4.
The BioGRID interaction database: 2013 update.
Chatr-Aryamontri A, Breitkreutz BJ, Heinicke S, Boucher L, Winter A, Stark C, Nixon J, Ramage L, Kolas N, O'Donnell L, Reguly T, Breitkreutz A, Sellam A, Chen D, Chang C, Rust J, Livstone M, Oughtred R, Dolinski K, Tyers M
Nucleic Acids Res. 2013 Jan;41(Database issue):D816-23.
The BioGRID interaction database: 2015 update.
Chatr-Aryamontri A, Breitkreutz BJ, Oughtred R, Boucher L, Heinicke S, Chen D, Stark C, Breitkreutz A, Kolas N, O'Donnell L, Reguly T, Nixon J, Ramage L, Winter A, Sellam A, Chang C, Hirschman J, Theesfeld C, Rust J, Livstone MS, Dolinski K, Tyers M.
Nucleic Acids Res. 2015 Jan;43(Database issue):D470-8.
Use of the BioGRID Database for Analysis of Yeast Protein and Genetic Interactions.
Oughtred R, Chatr-aryamontri A, Breitkreutz BJ, Chang CS, Rust JM, Theesfeld CL, Heinicke S, Breitkreutz A, Chen D, Hirschman J, Kolas N, Livstone MS, Nixon J, O'Donnell L, Ramage L, Winter A, Reguly T, Sellam A, Stark C, Boucher L, Dolinski K, Tyers M.
Cold Spring Harb Protoc. 2016 Jan 4;2016(1):pdb.prot088880.
BioGRID: A Resource for Studying Biological Interactions in Yeast.
Oughtred R, Chatr-aryamontri A, Breitkreutz BJ, Chang CS, Rust JM, Theesfeld CL, Heinicke S, Breitkreutz A, Chen D, Hirschman J, Kolas N, Livstone MS, Nixon J, O'Donnell L, Ramage L, Winter A, Reguly T, Sellam A, Stark C, Boucher L, Dolinski K, Tyers M.
Cold Spring Harb Protoc. 2016 Jan 4;2016(1):pdb.top080754.
The BioGRID interaction database: 2017 update
Chatr-Aryamontri A, Oughtred R, Boucher L, Rust J, Chang C, Kolas NK, O'Donnell L, Oster S, Theesfeld C, Sellam A, Stark C, Breitkreutz BJ, Dolinski K, Tyers M.
Nucleic Acids Res. 2017 Jan 4;45(D1):D369-D379.
| | Protein-Protein Interactions, Genetic Interaction Networks | | Pathway diagram tools | | Genes / Proteins: | 66,975 | | Interactions / Reactions: | 1,493,749 | | Experiments / PubMed IDs: | 63,354 | | Last Content Update: | August 1st, 2017 |
| | Arabidopsis thaliana, Escherichia coli, Bos taurus, Hepatitis C virus, Rattus norvegicus, Caenorhabditis elegans, Homo sapiens, Saccharomyces cerevisiae, Mus musculus, Schizosaccharomyces pombe, Danio rerio, Oryza sativa, Xenopus laevis, Drosophila melanogaster, Plasmodium falciparum, Human immunodeficiency virus | | 747 |  |
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