Pathguide: the pathway resource list
Home BioPAX cBio MSKCC
Full Record: WikiPathways  
Short NameWikiPathways
Full NameWikiPathways
Last ObservedMarch 1st, 2017
DescriptionAn open, public space for biological pathway editing. Users can freely contribute and modify the content.
Sample Data URL 
Data SourcePrimary
AvailabilityFree to all users
PubMed ArticlesWikiPathways: pathway editing for the people.
Pico AR, Kelder T, van Iersel MP, Hanspers K, Conklin BR, Evelo C.
PLoS Biol. 2008 Jul 22;6(7):e184.

WikiPathways: building research communities on biological pathways.
Kelder T, van Iersel MP, Hanspers K, Kutmon M, Conklin BR, Evelo CT, Pico AR
Nucleic Acids Res. 2012 Jan;40(Database issue):D1301-7.

WikiPathways for plants: a community pathway curation portal and a case study in rice and arabidopsis seed development networks.
Hanumappa M, Preece J, Elser J, Nemeth D, Bono G, Wu K, Jaiswal P.
Rice (N Y). 2013 May 29;6(1):14.

WikiPathways App for Cytoscape: Making biological pathways amenable to network analysis and visualization.
Kutmon M, Lotia S, Evelo CT, Pico AR.
Version 2. F1000Res. 2014 Jul 1 [revised 2014 Sep 11];3:152.

WikiPathways: capturing the full diversity of pathway knowledge.
Kutmon M, Riutta A, Nunes N, Hanspers K, Willighagen EL, Bohler A, Melius J, Waagmeester A, Sinha SR, Miller R, Coort SL, Cirillo E, Smeets B, Evelo CT, Pico AR.
Nucleic Acids Res. 2016 Jan 4;44(D1):D488-94.

Types of DataMetabolic Pathways, Signaling Pathways, Pathway Diagrams
Types of Tools
Pathways: 2,475
Last Content Update: August 10th, 2017
Major OrganismsBos taurus, Rattus norvegicus, Homo sapiens, Saccharomyces cerevisiae, Mus musculus
Relative Popularity64
Homepage Uptime StatisticsWebsite tracker - uptime monitoring service
Back to the List

"Pathguide: the pathway resource list" is maintained by Gary Bader1.
The website was originally created by Michael Cary 2 and was significantly updated and redesigned by Vuk Pavlovic1.
Thanks to Emek Demir for the Pathguide name.

1. Bader Lab
2. Sander Group

website tracker