Pathguide: the pathway resource list
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Full Record: OmniPath  
Short NameOmniPath
Full NameOmniPath
Last ObservedMay 15th, 2017
DescriptionOmnipath is a comprehensive collection of literature curated human signaling pathways. OmniPath focuses a great deal of effort on integration in order to develop a uniform representation of the data that includes references, directionality, sign and additional details (localization, compound effects, and mechanistic details) for each interaction as available. OmniPath integrates additional information on the structure and mechanism of the interactions, drug targets, functional annotation, tissue-specific expression and mutations to increase its applicability. OmniPath aims to provide free, annually updated and ready-to-use web resource (, as well as a complementary open-source, feature-rich Python module called pypath, which offers advanced possibilities for pathway analysis with unprecedented coverage and detail.
Sample Data URL 
Data SourceSecondary
AvailabilityFree to all users
PubMed ArticlesOmniPath: guidelines and gateway for literature-curated signaling pathway resources.
Turei D, Korcsmaros T, Saez-Rodriguez J.
Nat Methods. 2016 Nov 29;13(12):966-967.

Types of DataSignaling Pathways
Types of Tools
Genes / Proteins: 40,699
Interactions / Reactions: 72,341
Last Content Update: March 30th, 2017
Major OrganismsHomo sapiens
Relative Popularity
Homepage Uptime StatisticsWebsite tracker - uptime monitoring service
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"Pathguide: the pathway resource list" is maintained by Gary Bader1.
The website was originally created by Michael Cary 2 and was significantly updated and redesigned by Vuk Pavlovic1.
Thanks to Emek Demir for the Pathguide name.

1. Bader Lab
2. Sander Group

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